A TRUE deep-cycle battery needs lots of very thick lead plates, and it's hard to fit them into a typical 12 volt battery case. At best, you usually end up with one of the hybrid marine/rv batteries rather than a TRUE deep cycle.
A "cycle" is defined as discharging a fully charged battery down to 50% and then fully recharging it. An engine starting battery is not designed for that - lots of very thin lead plates in order to maximize the square inches of lead exposed to acid - and you will be lucky to get 40 to 50 cycles from one before you kill it. A marine/rv battery has thicker plates, and is usually good for 400 to 500 cycles. A TRUE deep cycle battery has much thicker plates yet, and if properly cared for, will give you 1,000 or maybe even 1,500 cycles.
Plus, the 6 volt golf carts usually have 200 amp hours of capacity, whereas the 12 volt usually only has 100 to 125 amp hours. You could parallel two 12 volts together to match the amp hours of two 6 volt golf cart batteries in series, but you'd still be dealing with the much lower cycle lifespan.